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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10193824 chr2:101148485 A/G LOC285359 chr3:101431278-101432259:+ 0.35 6.33 6.99E-10 Box Plot
BLCA rs10196187 chr2:237734104 A/G AAMP chr2:219128846-219134980:- 0.77 5.99 4.84E-9 Box Plot
BLCA rs10196187 chr2:237734104 A/G CAPN10 chr2:241526133-241557122:+ 0.7 6.58 1.52E-10 Box Plot
BLCA rs10196187 chr2:237734104 A/G DTYMK chr2:242615157-242626406:- 0.68 6.37 5.46E-10 Box Plot
BLCA rs10196187 chr2:237734104 A/G HDLBP chr2:242166679-242256476:- 0.71 6.08 2.97E-9 Box Plot
BLCA rs10196187 chr2:237734104 A/G ING5 chr2:242626500-242668893:+ 0.67 6.13 2.21E-9 Box Plot
BLCA rs10196187 chr2:237734104 A/G MFF chr2:228189867-228222552:+ 0.79 6.02 4.14E-9 Box Plot
BLCA rs10196187 chr2:237734104 A/G PPP1R7 chr2:242088991-242123067:+ 0.74 6.49 2.65E-10 Box Plot
BLCA rs10196187 chr2:237734104 A/G RNF25 chr2:219528587-219537134:- 0.75 6.77 4.71E-11 Box Plot
BLCA rs10196187 chr2:237734104 A/G SEPT2 chr2:242254515-242293442:+ 0.81 6.4 4.48E-10 Box Plot
BLCA rs10196187 chr2:237734104 A/G STK25 chr2:242432089-242449145:- 0.77 6.47 3.04E-10 Box Plot
BLCA rs10196187 chr2:237734104 A/G THAP4 chr2:242523820-242576864:- 0.75 6.91 1.99E-11 Box Plot
BLCA rs10198632 chr2:101076246 G/A LOC285359 chr3:101431278-101432259:+ 0.39 7.31 1.56E-12 Box Plot
BLCA rs10203995 chr2:39165054 C/T POU2F1 chr1:167190066-167396582:+ 0.54 6.71 7.19E-11 Box Plot
BLCA rs1021372 chr6:26632444 T/C ZNF322B chr9:99957633-99961910:- 0.54 9.9 1.02E-20 Box Plot